So I've been messing around with isosurfaces and I've been having a problem
with JMOL not correctly rendering isosurfaces as seen bellow.
http://imgur.com/q8uMv
It seems as though an improper distance is being used for one of the
hydrogens on the 5 member ring. I'm not quiet certain where to start
debugging this one so I thought I'd bring this problem here. I recreated
this bug on the stock version of JMOL as well using the attached mol2 file
and the following commands
load azulene.mol2
isosurface molecular translucent
dots
Cheers Andrew
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